Posters and Abstracts

  1. Cui J, Shu J3. Unraveling exosome-enabled cancer signaling: An integrated genomic approach, Abstract in Proceedings of the American Association of Cancer Research (AACR), Atlanta, GA, March 2019.
  2. Wu D, Shu J3, Pereira CB, Cui J, Adamec J, Zempleni J. Bovine mRNAs in Cow’s Milk Exosomes are Bioavailable and Translated into Peptides in Non-bovine species. American Society of Nutrition (ASN), Chicago, May 2019.
  3. (presentation) Sukreet S, Silva B3, Adamec J, Cui J, Zempleni J. Galactose and Sialo-Galactose Modifications in Glycoproteins on The Surface of Bovine Milk Exosome are Essential for Exosome Uptake in Non-Bovine Species, American Society of Nutrition (ASN), Chicago, May 2019.
  4. (presentation) Shu J3, Cui J. MiRDR-OSG: MicroRNA dynamic regulation analysis utilizing open science grid. Workshop on High Throughput Computing in Bioinformatics and Biomedicine using Open Science Grid, BIBM 2017, Kansas City, MO, November 13, 2017.
  5. (Conference presentation) Hakguder Z3, Cui J. A New Statistical Model for Genome-Scale MicroRNA Target Prediction. IEEE International Conference on Bioinformatics and Biomedicine (BIBM) 2017, Kansas City, MO, November 2017
  6. (presentation) Aditya Immaneni2, Juan Cui, Glucose-Insulin Stand-Alone Simulation Tool Design and Implementation in OSG. BIBM BIOSG 2017 Workshop.
  7. Silva B, Rad M, Cui J. A Mobile-Based Diet Monitoring and Advisory System for Obesity Management. In: Nebraska Center for the Prevention of Obesity Diseases; 2017 Mar, Lincoln, NE.
  8. Shu J, Gao T, Cui J. Identification of Exosomal microRNA Motifs using Graph Algorithms. In: Nebraska Center for the Prevention of Obesity Diseases; 2017 Mar, Lincoln, NE.
  9. Zempleni J, Zhou F, Wu, D, Manca S, Sadri M, Fernando S, Paz H, Shu J, Cui J. Bovine milk exosomes and their cargos may regulate metabolism through non-canonical pathways in non-bovine species, San Diego, CA, March 25/26, 2017. Abstract published in: Functional Foods and bioactive compounds in health and disease. Martirosyan D (ed.), Volume 21, Proceedings of the 21st International Conference, Food Science Publisher, Dallas, TX, p. 144-145
  10. Han J, Shu J, Cui J. A new system for human microRNA functional evaluation and network. In: Nebraska Center for the Prevention of Obesity Diseases 2nd Annual Symposium; 2016 Sep 21, Lincoln, NE.
  11. Shu J, Silva B, Cui J. Dynamic and modularized microRNA regulation and its implication in human cancers. In: Nebraska Center for the Prevention of Obesity Diseases 2nd Annual Symposium; 2016 Sep 21, Lincoln, NE.
  12. Di W, Shu J, Grove R, Boone C, Cui J, Adamec J, Zempleni J. MRNA cargos in cow’s milk exosomes are templates for translation. In: Nebraska Center for the Prevention of Obesity Diseases 2nd Annual Symposium; 2016 Sep 21, Lincoln, NE.
  13. Shu J, Silva B, Cui J. Dynamic and modularized microRNA regulation and its implication in human cancers. In: International Conference on Intelligent Systems for Molecular Biology (ISMB) 2016 Jul 8-12, Orlando, FL: ISMB 2016. 
  14. Shu J, Silva B, Cui J. Reconstruction and analysis of dynamic microRNA regulation in Cancers. In: Nebraska Center for the Prevention of Obesity Diseases 8th Annual Retreat; 2016 Apr 18, Lincoln, NE. 
  15. Silva B, Shu J, Cui J. A mobile based diet advisory and obesity management system. In: Nebraska Center for the Prevention of Obesity Diseases 8th Annual Retreat; 2016 Apr 18, Lincoln, NE. 
  16. Sukreet S, Zhang HY, Adamec J, Cui J, Zempleni J. Identification of Glycoproteins on the Surface of Cow’s Milk Exosomes that Mediate the Uptake of Exosomes into Human Colon Carcinoma Caco-2 Cells. Experimental Biology, San Diego, CA, April 2016 Abstract published in The FASEB Journal vol. 30 no. 1 Supplement 125.1. 
  17. Shu J, Chiang K, Zhao DY, Cui J#. Human Absorbable MicroRNA Prediction based on an Ensemble Manifold Ranking Model. IEEE International Conference on Bioinformatics and Biomedicine (BIBM), Washington, D.C., 9 - 12 November 2015, 295-300, doi:10.1109/BIBM.2015.7359697.
  18. Shu J, Chiang K, Zhao D, Cui J. MicroRNA cooperative regulation in obesity and cancers. In: Nebraska Center for the Prevention of Obesity Diseases 1st Annual Symposium; 2015 Sep 28, Lincoln, NE.
  19. Shu J, Chiang K, Cui J. Computational characterization of microRNA-mediated association between obesity and cancer. In: Proceedings of the 106th Annual Meeting of the American Association for Cancer Research; 2015 Apr 18-22; Philadelphia, PA. Philadelphia (PA): AACR 2015. Abstract published in Cancer Research 08/2015; 75(15 Supplement):234-234. DOI:10.1158/1538-7445.AM2015-234.
  20. Zempleni J, Howard K, Cui J, Shu J, Baier S. Humans absorb dietary microRNAs from chicken eggs, and the postprandial increase of plasma microRNAs includes a microRNA that humans cannot synthesize endogenously. International Society for Extracellular Vesicles, Washington D.C., April 23-26, 2015
  21. Baier S, Howard K, Cui J, Shu J, Zempleni J. MicroRNAs in chicken eggs are bioavailable in healthy adults and can modulate mRNA expression in peripheral blood mononuclear cells. Experimental Biology, Boston, MA, March 28 – April 1, 2015. 234, DOI:10.1158/1538-7445.AM2015-234
  22. Shu J, Chiang K, Zempleni J, Cui J. Computational characterization of exogenous microRNAs transfer into human circulation. In: Nebraska Center for the Prevention of Obesity Diseases 7th Annual Retreat; 2015 Mar 13, Lincoln, NE.
  23. Chiang K, Shu J, Zempleni J, Cui J. Dietary microRNA database (DMD): an archive database and analytic tool for microRNAs in human foods. In: Nebraska Center for the Prevention of Obesity Diseases 7th Annual Retreat; 2015 Mar 13, Lincoln, NE. 
  24. Zempleni J, Baier SR, Cui J, Wolf T. Bovine microRNAs are bioavailable and affect gene expression in humans and mice.  American Society for Cell Biology, Philadelphia, PA, October 6-10, 2014.
  25. Wang Y, Wang G, Meng D, Huang L, Blanzieri E, Cui J. A Markov Clustering based Link Clustering Method for Overlapping Module Identification in Yeast Protein-protein Interaction Networks. THE 10th International Symposium on Bioinformatics Research and Applications (ISBRA2014). LNBI 8492, p.385, 2014.
  26. Shu J, Cui J. Dynamic microRNA regulation in human gene network. In: Nebraska Gateway to Nutrigenomics 6th Annual Retreat; 2014 Jun 9, Lincoln, NE. 
  27. Chiang K, Zempleni J, Cui J. Prediction of nuclear and locally encoded mitochondrion. In: Nebraska Gateway to Nutrigenomics 6th Annual Retreat; 2014 Jun 9, Lincoln, NE.
  28. Cui J, Xu Y. Toward understanding the genomic alterations in human gastric cancer. Abstract in Proceedings of the American Association of Caner Research (AACR), San Diego, CA, April 2014. doi:10.1158/1538-7445.AM2014-5174.